2QHX Oxidoreductase date Jul 03, 2007
title Structure Of Pteridine Reductase From Leishmania Major Compl A Ligand
authors F.Gibellini, K.Mcluskey, L.Tulloch, W.N.Hunter
compound source
Molecule: Pteridine Reductase 1
Chain: A, B, C, D
Synonym: H Region Methotrexate Resistance Protein
Ec: 1.5.1.33
Engineered: Yes
Organism_scientific: Leishmania Major
Organism_taxid: 5664
Gene: Ptr1, Hmtxr
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 15b
symmetry Space Group: P 21 21 21
R_factor 0.183 R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
95.499 104.231 136.865 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.61 Å
ligand FE1, IOD, NAP enzyme Oxidoreductase E.C.1.5.1.33 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceDiscovery of potent pteridine reductase inhibitors to guide antiparasite drug development., Cavazzuti A, Paglietti G, Hunter WN, Gamarro F, Piras S, Loriga M, Allecca S, Corona P, McLuskey K, Tulloch L, Gibellini F, Ferrari S, Costi MP, Proc Natl Acad Sci U S A. 2008 Feb 5;105(5):1448-53. Epub 2008 Feb 1. PMID:18245389
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk]
  • Biological Unit Coordinates (2qhx.pdb1.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 2QHX
  • CSU: Contacts of Structural Units for 2QHX
  • Likely Quarternary Molecular Structure file(s) for 2QHX
  • Structure Factors (333 Kb)
  • Retrieve 2QHX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QHX from S2C, [Save to disk]
  • Re-refined 2qhx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QHX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QHX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QHX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qhx_C] [2qhx_B] [2qhx_A] [2qhx_D] [2qhx]
  • SWISS-PROT database: [Q01782]
  • Domain organization of [PTR1_LEIMA] by SWISSPFAM
  • Other resources with information on 2QHX
  • Community annotation for 2QHX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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