2R6Z Transferase date Sep 06, 2007
title Crystal Structure Of The Sam-Dependent Methyltransferase Ngo Neisseria Gonorrhoeae, Northeast Structural Genomics Consor Target Ngr48
authors F.Forouhar, M.Abashidze, J.Seetharaman, L.Mao, C.Nwosu, Y.Fang, R. M.C.Baran, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeas Structural Genomics Consortium (Nesg)
compound source
Molecule: Upf0341 Protein In Rsp 3' Region
Chain: A, B
Engineered: Yes
 Organism_scientific: Neisseria Gonorrhoeae
Organism_taxid: 485
Strain: Ms11, Fa 1090
Gene: Ngo1261
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+Magic
Expression_system_vector_type: Plasmid
Expression_system_vector: Bl21
Expression_system_plasmid: Pet21
symmetry Space Group: P 1 21 1
R_factor 0.215 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.233 43.186 103.570 90.00 97.54 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (2r6z.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 2R6Z
  • CSU: Contacts of Structural Units for 2R6Z
  • Likely Quarternary Molecular Structure file(s) for 2R6Z
  • Structure Factors (1295 Kb)
  • Retrieve 2R6Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R6Z from S2C, [Save to disk]
  • Re-refined 2r6z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2R6Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2R6Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R6Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r6z] [2r6z_A] [2r6z_B]
  • SWISS-PROT database: [P72077]
  • Domain organization of [YRSP_NEIGO] by SWISSPFAM
    • Other resources with information on 2R6Z
  • Community annotation for 2R6Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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