3GSD	Metal Binding Protein	date	Mar 26, 2009
title	2.05 Angstrom Structure Of A Divalent-Cation Tolerance Prote From Yersinia Pestis
authors	G.Minasov, Z.Wawrzak, T.Skarina, O.Onopriyenko, S.N.Peterson, A.S W.F.Anderson, Center For Structural Genomics Of Infectious D (Csgid)
compound		source
Molecule: Divalent-Cation Tolerance Protein Cuta Chain: A, B, C, D, E, F, G, H, I, J, K, L Engineered: Yes		Organism_scientific: Yersinia Pestis Co92 Organism_taxid: 214092 Strain: Co92 Biovar Orientalis Gene: Cuta, Y0604, Ypo0346, Yp_0500 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmcsg7
symmetry	Space Group: C 2 2 21	R_factor 0.156 R_Free 0.200
crystal cell	length a length b length c angle alpha angle beta angle gamma 140.782 157.914 157.132 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.05 Å
ligand	EDO, EPE, NA, PEG	enzyme
Gene	YP
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (255 Kb) [Save to disk] Biological Unit Coordinates (3gsd.pdb1.gz) 64 Kb Biological Unit Coordinates (3gsd.pdb2.gz) 65 Kb Biological Unit Coordinates (3gsd.pdb3.gz) 64 Kb Biological Unit Coordinates (3gsd.pdb4.gz) 64 Kb LPC: Ligand-Protein Contacts for 3GSD CSU: Contacts of Structural Units for 3GSD Likely Quarternary Molecular Structure file(s) for 3GSD Structure Factors (1959 Kb) Retrieve 3GSD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GSD from S2C, [Save to disk] Re-refined 3gsd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GSD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GSD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GSD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gsd_D] [3gsd_C] [3gsd_K] [3gsd_E] [3gsd] [3gsd_H] [3gsd_J] [3gsd_B] [3gsd_F] [3gsd_L] [3gsd_I] [3gsd_G] [3gsd_A] SWISS-PROT database: [Q74XD3] Domain organization of [CUTA_YERPE] by SWISSPFAM

Other resources with information on 3GSD

Community annotation for 3GSD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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