4V6B Crystal structure of human ferritin Phe167SerfsX26 mutant. date
authors Hurley, T.D., Vidal, R.
compound source
symmetry
R_factor
R_Free 0.291
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
note 4V6B supersedes 3HX2, 3HX5, 3HX7
Gene
Ontology
ChainFunctionProcessComponent
AC, BC, AT, CQ, BN, CD, Ba, BW, AO, Cb, Ak, Al, Bd, Ck, Ax, Bj, CW, BP, BE, CK, Bs, Bf, Af, Cg, AA, AJ, Bp, Cp, CT, BF, CA, AM, AH, CM, Bn, Cr, Ct, BT, CF, BA, AE, At, CC, Br, CB, Bt, Av, Cn, Ae, Ap, An, AD, Cl, Ab, AF, BJ, AX, CI, Bl, Bg, Cv, CX, Ah, Bw, Bc, Cd, Ar, BH, AR, CS, AW, BR, BQ, BB, CV, CE, Bu, CP, Ch, Am, BL, AB, BO, Bo, AU, Ag, AL, CJ, Cu, CG, BI, Cj, AG, Cc, Ac, AP, CO, Cm, AI, Cq, AQ, AN, Aj, AK, Bi, CL, CU, BX, Co, Bq, Au, Ao, Bx, CR, Ci, Bm, Cf, Be, As, CN, BG, BS, Cs, Cx, CH, Aw, BU, Ca, Bv, AS, Ai, Cw, AV, Bh, Bk, BM, BK, BV, Aq, Ce, Bb, Ad, Aa, BD


Primary referenceUnraveling of the E-helices and disruption of 4-fold pores are associated with iron mishandling in a mutant ferritin causing neurodegeneration., Baraibar MA, Muhoberac BB, Garringer HJ, Hurley TD, Vidal R, J Biol Chem. 2010 Jan 15;285(3):1950-6. Epub 2009 Nov 18. PMID:19923220
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1627 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 4V6B
  • Structure Factors (12555 Kb)
  • Retrieve 4V6B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4V6B from S2C, [Save to disk]
  • View 4V6B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4V6B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v6b_AF] [4v6b_BE] [4v6b_AI] [4v6b_As] [4v6b_BW] [4v6b_Ck] [4v6b_CQ] [4v6b_BC] [4v6b_Be] [4v6b_Af] [4v6b_AO] [4v6b_Bs] [4v6b_CC] [4v6b_CG] [4v6b_Am] [4v6b_Bm] [4v6b_Cn] [4v6b_Bj] [4v6b_AR] [4v6b_BH] [4v6b_AE] [4v6b_BT] [4v6b_CU] [4v6b_AX] [4v6b_Av] [4v6b_Aq] [4v6b_Bl] [4v6b_AU] [4v6b_AN] [4v6b_AW] [4v6b_BV] [4v6b_CA] [4v6b_BO] [4v6b_Cp] [4v6b_BM] [4v6b_AS] [4v6b_CI] [4v6b_Cs] [4v6b_Bx] [4v6b_Br] [4v6b_CJ] [4v6b_CN] [4v6b_CX] [4v6b_Cg] [4v6b_Cj] [4v6b_Bu] [4v6b_Aj] [4v6b_Co] [4v6b_CK] [4v6b_Au] [4v6b_BB] [4v6b_AV] [4v6b_Ct] [4v6b_Ag] [4v6b_Cx] [4v6b_At] [4v6b_CD] [4v6b_CB] [4v6b_AL] [4v6b_Al] [4v6b_Ai] [4v6b_Ap] [4v6b_CH] [4v6b_CS] [4v6b_Bw] [4v6b_BI] [4v6b_BX] [4v6b_CM] [4v6b_Ad] [4v6b_Ce] [4v6b_Cc] [4v6b_Bg] [4v6b_Bi] [4v6b_Bf] [4v6b_BU] [4v6b_AQ] [4v6b_Bo] [4v6b_BJ] [4v6b_CO] [4v6b_Ar] [4v6b_Ao] [4v6b_Ac] [4v6b_Cm] [4v6b_AT] [4v6b_Bp] [4v6b_An] [4v6b_Bd] [4v6b_AD] [4v6b_CP] [4v6b_Cr] [4v6b_AA] [4v6b_Cb] [4v6b_Cf] [4v6b_BD] [4v6b_Cw] [4v6b_Bv] [4v6b_Cq] [4v6b_Ae] [4v6b_Ch] [4v6b_CV] [4v6b_BL] [4v6b_Cv] [4v6b_CW] [4v6b_CT] [4v6b_Cd] [4v6b_Bn] [4v6b_Ci] [4v6b_Bh] [4v6b_Bc] [4v6b_Ah] [4v6b_CR] [4v6b_CL] [4v6b_BA] [4v6b_Bk] [4v6b_BP] [4v6b_Ak] [4v6b_CF] [4v6b_Bt] [4v6b_Ab] [4v6b_BF] [4v6b_AK] [4v6b_Bq] [4v6b_AJ] [4v6b_CE] [4v6b_BN] [4v6b_BS] [4v6b_AP] [4v6b_BR] [4v6b_Cu] [4v6b_Ax] [4v6b_AG] [4v6b_Aw] [4v6b_BK] [4v6b_BG] [4v6b_Ca] [4v6b] [4v6b_Bb] [4v6b_AH] [4v6b_AM] [4v6b_AB] [4v6b_Aa] [4v6b_Cl] [4v6b_BQ] [4v6b_AC] [4v6b_Ba]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4V6B
  • Community annotation for 4V6B at PDBWiki (http://pdbwiki.org)

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