3K1Q Virus date 9-0 20, 1998
authors L.P.Cheng, J.Zhu, W.H.Hiu, X.K.Zhang, B.Honig, Q.Fang, Z.H.Z
compound source
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A
  • mRNA (guanine-N7-)-methyltra...


    • C


    E, D


    O, J, W, X, P, K, V, Q, I, U
  • host cell surface binding


    • Primary referenceBackbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics., Cheng L, Zhu J, Hui WH, Zhang X, Honig B, Fang Q, Zhou ZH, J Mol Biol. 2010 Apr 2;397(3):852-63. Epub 2009 Dec 28. PMID:20036256
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1482 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 3K1Q
  • Retrieve 3K1Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3K1Q from S2C, [Save to disk]
    • View 3K1Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3K1Q
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3k1q_H] [3k1q_G] [3k1q_S] [3k1q_R] [3k1q] [3k1q_U] [3k1q_Q] [3k1q_I] [3k1q_Y] [3k1q_M] [3k1q_B] [3k1q_X] [3k1q_E] [3k1q_N] [3k1q_D] [3k1q_A] [3k1q_L] [3k1q_P] [3k1q_W] [3k1q_C] [3k1q_V] [3k1q_T] [3k1q_J] [3k1q_O] [3k1q_K] [3k1q_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3K1Q: [ZnF_C2H2 ] by SMART
    • Other resources with information on 3K1Q
  • Community annotation for 3K1Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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