3U41 Chaperone date Oct 06, 2011
title Crystal Structure Of Escherichia Coli Dmsd In Space Group P2
authors C.M.Stevens, M.Paetzel
compound source
Molecule: Twin-Arginine Leader-Binding Protein Dmsd
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Gene: B1591, Dmsd, Jw5262, Ynfi
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 21 21 21
R_factor 0.230 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.275 96.221 210.243 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand CL, GOL, PEG, SO4, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (577 Kb) [Save to disk]
  • Biological Unit Coordinates (3u41.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (3u41.pdb2.gz) 72 Kb
  • Biological Unit Coordinates (3u41.pdb3.gz) 73 Kb
  • Biological Unit Coordinates (3u41.pdb4.gz) 73 Kb
  • Biological Unit Coordinates (3u41.pdb5.gz) 72 Kb
  • Biological Unit Coordinates (3u41.pdb6.gz) 71 Kb
  • Biological Unit Coordinates (3u41.pdb7.gz) 72 Kb
  • Biological Unit Coordinates (3u41.pdb8.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 3U41
  • CSU: Contacts of Structural Units for 3U41
  • Structure Factors (755 Kb)
  • Retrieve 3U41 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3U41 from S2C, [Save to disk]
  • Re-refined 3u41 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3U41 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3U41
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3U41, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3u41_E] [3u41] [3u41_H] [3u41_F] [3u41_D] [3u41_G] [3u41_C] [3u41_B] [3u41_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3U41
  • Community annotation for 3U41 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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