4AYP	Hydrolase	date	Jun 21, 2012
title	Structure Of The Gh47 Processing Alpha-1,2-Mannosidase From Caulobacter Strain K31 In Complex With Thiomannobioside
authors	A.J.Thompson, J.Dabin, J.Iglesias-Fernandez, A.Iglesias-Fernand Z.Dinev, S.J.Williams, A.Siriwardena, C.Moreland, T.C.Hu, D.K.Sm H.J.Gilbert, C.Rovira, G.J.Davies
compound		source
Molecule: Mannosyl-Oligosaccharide 1,2-Alpha-Mannosidase Chain: A Synonym: Alpha-1\,2-Mannosidase Ec: 3.2.1.113 Engineered: Yes		Organism_scientific: Caulobacter Sp. Organism_taxid: 366602 Strain: K31 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: Tuner Expression_system_vector_type: Plasmid Expression_system_vector: Pet21a
symmetry	Space Group: H 3	R_factor 0.096 R_Free 0.106
crystal cell	length a length b length c angle alpha angle beta angle gamma 144.135 144.135 50.301 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	0.85 Å
ligand	CA, MAN, NA, Z5L	enzyme	Hydrolase E.C.3.2.1.113 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	The reaction coordinate of a bacterial GH47 alpha-mannosidase: a combined quantum mechanical and structural approach., Thompson AJ, Dabin J, Iglesias-Fernandez J, Ardevol A, Dinev Z, Williams SJ, Bande O, Siriwardena A, Moreland C, Hu TC, Smith DK, Gilbert HJ, Rovira C, Davies GJ, Angew Chem Int Ed Engl. 2012 Oct 29;51(44):10997-1001. doi:, 10.1002/anie.201205338. Epub 2012 Sep 26. PMID:23012075

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk] Biological Unit Coordinates (4ayp.pdb1.gz) 171 Kb LPC: Ligand-Protein Contacts for 4AYP CSU: Contacts of Structural Units for 4AYP Structure Factors (4820 Kb) Retrieve 4AYP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4AYP from S2C, [Save to disk] Re-refined 4ayp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4AYP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ayp_A] [4ayp] SWISS-PROT database: Domain organization of by SWISSPFAM

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