4TVX Hydrolase Rna date 4-0 20, 1998
authors R.N.Jackson, S.M.Golden, J.Carter, B.Wiedenheft
compound source
symmetry Space Group: P 21 21 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
200.851 214.541 217.383 90.00 90.00 90.00
method X-Ray Diffractionresolution
note 4TVX (Molecule of the Month:pdb181)supersedes 1VY8, 1VY9
Gene
Ontology
ChainFunctionProcessComponent
I, U


K, V, J, W


M, A


S, F, N, E, Q, C, O, P, B, D, R, G


T, H


Primary referenceCrystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli., Jackson RN, Golden SM, van Erp PB, Carter J, Westra ER, Brouns SJ, van der Oost J, Terwilliger TC, Read RJ, Wiedenheft B, Science. 2014 Aug 7. pii: 1256328. PMID:25103409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3051 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 4TVX
  • Structure Factors (2625 Kb)
  • Retrieve 4TVX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TVX from S2C, [Save to disk]
    • View 4TVX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TVX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tvx_V] [4tvx_B] [4tvx_L] [4tvx_W] [4tvx_U] [4tvx_D] [4tvx_J] [4tvx_T] [4tvx_P] [4tvx_C] [4tvx_N] [4tvx_F] [4tvx_I] [4tvx_Q] [4tvx_G] [4tvx] [4tvx_K] [4tvx_A] [4tvx_O] [4tvx_S] [4tvx_X] [4tvx_E] [4tvx_M] [4tvx_R] [4tvx_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4TVX: [CRISPR_assoc ] by SMART
    • Other resources with information on 4TVX
  • Community annotation for 4TVX at PDBWiki (http://pdbwiki.org)

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