4V6V	Tetracycline resistance protein Tet(O) bound to the ribosome	date
authors	Li, W., Atkinson, G.C., Thakor, N.S., Allas, U., Lu, C., Chan, K.Y., Tenson, T., Schulten, K., Wilson, K.S., Hauryliuk, V., Frank, J.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	9.80
note	4V6V supersedes 3J36, 3J37
Gene Ontology	Chain Function Process Component A1 AB AC AD AE AF AG AH AI AJ AK AL AM AN AO mRNA binding involved in pos... AP nuclease activity endonuclease activity endodeoxyribonuclease activi... AQ AR AS AT ornithine decarboxylase inhi... AU B0 B1 B2 B3 B4 B5 B6 B7 B8 B9 BC BD BE BF BG BH BJ BK BL BN BO BP BQ BR BS BT BU translation repressor activi... BV BW BX BY BZ
Primary reference	Mechanism of tetracycline resistance by ribosomal protection protein Tet(O)., Li W, Atkinson GC, Thakor NS, Allas U, Lu CC, Chan KY, Tenson T, Schulten K, Wilson KS, Hauryliuk V, Frank J, Nat Commun. 2013;4:1477. doi: 10.1038/ncomms2470. PMID:23403578

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1514 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V6V Retrieve 4V6V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V6V from S2C, [Save to disk]

View 4V6V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V6V

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v6v_AO] [4v6v_AC] [4v6v_BQ] [4v6v_AL] [4v6v_BC] [4v6v_BO] [4v6v_AT] [4v6v_AB] [4v6v_B5] [4v6v_AA] [4v6v_AS] [4v6v_BL] [4v6v_AH] [4v6v_B6] [4v6v_BF] [4v6v] [4v6v_BH] [4v6v_BV] [4v6v_B2] [4v6v_AF] [4v6v_AQ] [4v6v_AU] [4v6v_B4] [4v6v_BD] [4v6v_B1] [4v6v_B8] [4v6v_BK] [4v6v_B9] [4v6v_BR] [4v6v_BT] [4v6v_A1] [4v6v_B3] [4v6v_BW] [4v6v_BY] [4v6v_Ba] [4v6v_BX] [4v6v_AG] [4v6v_BJ] [4v6v_B0] [4v6v_AP] [4v6v_BZ] [4v6v_AK] [4v6v_BN] [4v6v_BG] [4v6v_BS] [4v6v_BE] [4v6v_BP] [4v6v_AJ] [4v6v_AM] [4v6v_B7] [4v6v_AR] [4v6v_A3] [4v6v_BA] [4v6v_BU] [4v6v_AN] [4v6v_AD] [4v6v_AI] [4v6v_A2] [4v6v_AE] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V6V: [EFG_C] [EFG_IV] [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

Other resources with information on 4V6V

Community annotation for 4V6V at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---