4V85	Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.	date
authors	Zhou, J., Lancaster, L., Trakhanov, S., Noller, H.F.
compound		source
symmetry		R_factor R_Free 0.25
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.20
note	4V85 supersedes 3SFS, 3SGF
Gene Ontology	Chain Function Process Component AB AC AD AE AF AG AH AI AJ AK AL AM AN AO mRNA binding involved in pos... AP nuclease activity endonuclease activity endodeoxyribonuclease activi... AQ AR AS AT ornithine decarboxylase inhi... AU AW B0 B1 B2 B3 B4 B5 B6 B7 B8 BC BD BE BF BG BH BI BJ, BL, BM, BK BN BO BP BQ BR BS BT BU translation repressor activi... BV BW BX BY BZ
Primary reference	Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome., Zhou J, Lancaster L, Trakhanov S, Noller HF, RNA. 2011 Dec 20. PMID:22187675

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1188 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V85 Structure Factors (4127 Kb) Retrieve 4V85 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V85 from S2C, [Save to disk]

View 4V85 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V85

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v85_BR] [4v85_BX] [4v85_BP] [4v85_AO] [4v85_AG] [4v85_AH] [4v85_BE] [4v85_BY] [4v85_B8] [4v85_BD] [4v85_BA] [4v85_BM] [4v85_BZ] [4v85_BG] [4v85_B6] [4v85_AW] [4v85_AI] [4v85_B3] [4v85_AS] [4v85_BB] [4v85_BF] [4v85_BO] [4v85_BW] [4v85_AJ] [4v85_BL] [4v85_BN] [4v85_AK] [4v85_B5] [4v85_BH] [4v85_B2] [4v85_AT] [4v85_B0] [4v85_BQ] [4v85_AP] [4v85_AY] [4v85_AN] [4v85_BT] [4v85_BI] [4v85_BU] [4v85_AL] [4v85_AV] [4v85_AR] [4v85] [4v85_BS] [4v85_BJ] [4v85_BK] [4v85_AE] [4v85_AQ] [4v85_B4] [4v85_AC] [4v85_AB] [4v85_AM] [4v85_AD] [4v85_B7] [4v85_AA] [4v85_AF] [4v85_BV] [4v85_B1] [4v85_BC] [4v85_AU] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V85: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

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Community annotation for 4V85 at PDBWiki (http://pdbwiki.org)

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