4V8Q	Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome	date
authors	Neubauer, C., Gillet, R., Kelley, A.C., Ramakrishnan, V.
compound		source
symmetry		R_factor R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.10
note	4V8Q supersedes 4ABR, 4ABS
Gene Ontology	Chain Function Process Component A0 A1 A2 A3 A4 A5 A6 A7 A8 A9 AC AD AE AF AG AH AN AO AP AQ AR AS AT AU AV AW AX AY AZ B2 BB BC BD BE BF BG BH BI BJ BK BL BM BN BO BP BQ BR BS BT BU BZ
Primary reference	Decoding in the absence of a codon by tmRNA and SmpB in the ribosome., Neubauer C, Gillet R, Kelley AC, Ramakrishnan V, Science. 2012 Mar 16;335(6074):1366-9. PMID:22422985

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1865 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V8Q Structure Factors (4036 Kb) Retrieve 4V8Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V8Q from S2C, [Save to disk]

View 4V8Q in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V8Q

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v8q_A8] [4v8q_BN] [4v8q_BX] [4v8q_A9] [4v8q_BS] [4v8q_AT] [4v8q_B2] [4v8q_BT] [4v8q_BV] [4v8q_AY] [4v8q_BU] [4v8q_BW] [4v8q_AS] [4v8q_BH] [4v8q_AF] [4v8q_AP] [4v8q_AW] [4v8q_A7] [4v8q_BD] [4v8q_BC] [4v8q_BI] [4v8q_A5] [4v8q_AA] [4v8q_BE] [4v8q_BQ] [4v8q_AN] [4v8q_BP] [4v8q_BR] [4v8q_BK] [4v8q_AB] [4v8q] [4v8q_BO] [4v8q_A0] [4v8q_AC] [4v8q_BA] [4v8q_AQ] [4v8q_AH] [4v8q_AV] [4v8q_AX] [4v8q_AJ] [4v8q_BG] [4v8q_A2] [4v8q_BZ] [4v8q_BY] [4v8q_A3] [4v8q_BM] [4v8q_AR] [4v8q_AK] [4v8q_AG] [4v8q_BB] [4v8q_A4] [4v8q_A6] [4v8q_BJ] [4v8q_AD] [4v8q_AZ] [4v8q_BL] [4v8q_AE] [4v8q_BF] [4v8q_AO] [4v8q_A1] [4v8q_AU] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4V8Q: [KH] [KOW] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_S10] [Ribosomal_S15] [Ribosomal_S4] [S4 ] by SMART

Other resources with information on 4V8Q

Community annotation for 4V8Q at PDBWiki (http://pdbwiki.org)

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