5AJ0	Cryo electron microscopy of actively translating human polysomes (POST state).	date
authors	Behrmann, E., Loerke, J., Budkevich, T.V., Yamamoto, K., Schmidt, A., Penczek, P.A., Vos, M.R., Burger, J., Mielke, T., Scheerer, P., Spahn, C.M.T.
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.50
Gene Ontology	Chain Function Process Component AA AB AC AD AE AF AG AH AI cytosolic large ribosomal su... AJ AK AL AM AN AO AP AQ AR AS AT AU AV AW AX AY AZ Aa Ab Ac Ad Ae Af Ag Ah Ai Aj Ak Al Am intracellular transport of v... An Ao cytosolic large ribosomal su... Ap Aq At Au BA virus receptor activity cytosolic small ribosomal su... BB cytosolic small ribosomal su... BC cytosolic small ribosomal su... BD cytosolic small ribosomal su... BE BF cytosolic small ribosomal su... BG cytosolic small ribosomal su... BH cytosolic small ribosomal su... BI cytosolic small ribosomal su... BJ cytosolic small ribosomal su... BK cytosolic small ribosomal su... BL cytosolic small ribosomal su... BM cytosolic small ribosomal su... BN cytosolic small ribosomal su... BO translation regulator activi... cytosolic small ribosomal su... BP cytosolic small ribosomal su... BQ cytosolic small ribosomal su... BR cytosolic small ribosomal su... BS small ribosomal subunit cytosolic small ribosomal su... BT cytosolic small ribosomal su... BU cytosolic small ribosomal su... BV cytosolic small ribosomal su... BW cytosolic small ribosomal su... BX cytosolic small ribosomal su... BY small ribosomal subunit cytosolic small ribosomal su... BZ small ribosomal subunit cytosolic small ribosomal su... Ba small ribosomal subunit cytosolic small ribosomal su... Bb cytosolic small ribosomal su... Bc small ribosomal subunit cytosolic small ribosomal su... Bd small ribosomal subunit cytosolic small ribosomal su... Be small ribosomal subunit cytosolic small ribosomal su... Bf intracellular transport of v... small ribosomal subunit cytosolic small ribosomal su... Bg protein tyrosine kinase inhi...
Primary reference	Structural snapshots of actively translating human ribosomes., Behrmann E, Loerke J, Budkevich TV, Yamamoto K, Schmidt A, Penczek PA, Vos MR, Burger J, Mielke T, Scheerer P, Spahn CM, Cell. 2015 May 7;161(4):845-57. doi: 10.1016/j.cell.2015.03.052. PMID:25957688

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1051 Kb) [Save to disk] CSU: Contacts of Structural Units for 5AJ0 Retrieve 5AJ0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5AJ0 from S2C, [Save to disk]

View 5AJ0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5AJ0

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5aj0_Aa] [5aj0_AE] [5aj0_A4] [5aj0_Bc] [5aj0_BB] [5aj0_BU] [5aj0_Ag] [5aj0_An] [5aj0_Ae] [5aj0_BS] [5aj0_BK] [5aj0_BY] [5aj0_Al] [5aj0_BT] [5aj0_BL] [5aj0_BQ] [5aj0_By] [5aj0_Au] [5aj0_Aj] [5aj0_BI] [5aj0_AT] [5aj0_AS] [5aj0_AH] [5aj0_Bd] [5aj0_BX] [5aj0_AJ] [5aj0_AU] [5aj0_BA] [5aj0_BO] [5aj0_AK] [5aj0_AN] [5aj0_AL] [5aj0_Ah] [5aj0_BM] [5aj0_BG] [5aj0_AZ] [5aj0_Ba] [5aj0_AO] [5aj0_BE] [5aj0_Ab] [5aj0] [5aj0_BZ] [5aj0_A3] [5aj0_Ak] [5aj0_AA] [5aj0_AC] [5aj0_AV] [5aj0_BP] [5aj0_AF] [5aj0_BH] [5aj0_BJ] [5aj0_Bg] [5aj0_AP] [5aj0_Bf] [5aj0_BV] [5aj0_AY] [5aj0_A2] [5aj0_Bw] [5aj0_AI] [5aj0_Am] [5aj0_Ad] [5aj0_BR] [5aj0_BD] [5aj0_AQ] [5aj0_BN] [5aj0_BF] [5aj0_Bx] [5aj0_AG] [5aj0_Be] [5aj0_Ai] [5aj0_AX] [5aj0_Ac] [5aj0_BW] [5aj0_BC] [5aj0_AB] [5aj0_AM] [5aj0_At] [5aj0_Bv] [5aj0_Bb] [5aj0_Ap] [5aj0_Ao] [5aj0_AD] [5aj0_AW] [5aj0_Af] [5aj0_Aq] [5aj0_AR] [5aj0_B1] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 5AJ0: [KH] [KOW] [RL11] [Ribosomal_L14] [Ribosomal_L15e] [Ribosomal_L19e] [Ribosomal_L2] [Ribosomal_L2_C] [Ribosomal_L31e] [Ribosomal_L32e] [Ribosomal_L40e] [Ribosomal_S10] [Ribosomal_S13_N] [Ribosomal_S15] [Ribosomal_S19e] [Ribosomal_S27] [Ribosomal_S3Ae] [Ribosomal_S4] [Ribosomal_S6e] [S4] [TRASH] [UBQ] [WD40 ] by SMART

Other resources with information on 5AJ0

Community annotation for 5AJ0 at PDBWiki (http://pdbwiki.org)

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