OCA Atlas for 5EUJ

5EUJ

Lyase

date

5-1 20, 1999

authors

L.Buddrus, S.J.Crennell, D.J.Leak, M.J.Danson, E.S.V.Andrews V.L.Arcus

compound

source

symmetry

Space Group: P 1 21 1

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma
204.557	177.390	244.553	90.00	112.94	90.00

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
S, F, T, N, K, E, V, Q, M, C, L, A, J, O, W, X, P, B, H, D, R, I, G, U

Primary reference

Crystal structure of pyruvate decarboxylase from Zymobacter palmae., Buddrus L, Andrews ES, Leak DJ, Danson MJ, Arcus VL, Crennell SJ, Acta Crystallogr F Struct Biol Commun. 2016 Sep;72(Pt 9):700-6. doi:, 10.1107/S2053230X16012012. Epub 2016 Aug 26. PMID:27599861

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1936 Kb) [Save to disk]

CSU: Contacts of Structural Units for 5EUJ

Structure Factors (59337 Kb)

Retrieve 5EUJ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5EUJ from S2C, [Save to disk]

View 5EUJ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5EUJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5euj_G] [5euj_P] [5euj_F] [5euj_I] [5euj_B] [5euj_Q] [5euj_L] [5euj_J] [5euj_S] [5euj_W] [5euj_U] [5euj_H] [5euj_K] [5euj_X] [5euj_R] [5euj_E] [5euj_M] [5euj_C] [5euj_N] [5euj_D] [5euj_V] [5euj] [5euj_O] [5euj_T] [5euj_A]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Other resources with information on 5EUJ

Community annotation for 5EUJ at PDBWiki (http://pdbwiki.org)

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]