5T2C	Ribosome	date	6-0 20, 1998
authors	X.Zhang, M.Lai, Z.H.Zhou
compound		source
symmetry	Space Group: P 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 1.000 1.000 1.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A0 small ribosomal subunit cytosolic small ribosomal su... AB cytosolic small ribosomal su... AC cytosolic small ribosomal su... AD cytosolic small ribosomal su... AE small ribosomal subunit cytosolic small ribosomal su... AF small ribosomal subunit cytosolic small ribosomal su... AG small ribosomal subunit cytosolic small ribosomal su... AH intracellular transport of v... small ribosomal subunit cytosolic small ribosomal su... AI protein tyrosine kinase inhi... AJ cytosolic small ribosomal su... AK cytosolic small ribosomal su... AL cytosolic small ribosomal su... AM cytosolic small ribosomal su... AN cytosolic small ribosomal su... AO translation regulator activi... cytosolic small ribosomal su... AP cytosolic small ribosomal su... AQ small ribosomal subunit cytosolic small ribosomal su... AR small ribosomal subunit cytosolic small ribosomal su... AT small ribosomal subunit cytosolic small ribosomal su... AU cytosolic small ribosomal su... AV cytosolic small ribosomal su... Ao virus receptor activity cytosolic small ribosomal su... Ap cytosolic small ribosomal su... Aq cytosolic small ribosomal su... Ar ribosome cytosolic small ribosomal su... As cytosolic small ribosomal su... At cytosolic small ribosomal su... Au cytosolic small ribosomal su... Av cytosolic small ribosomal su... Aw cytosolic small ribosomal su... Ax cytosolic small ribosomal su... Ay cytosolic small ribosomal su... Az cytosolic small ribosomal su... D E F G H I J K L M N O P Q R S T U V W X Y Z a b c d e f g intracellular transport of v... h i cytosolic large ribosomal su... j k l m n o p q r s t
Primary reference	Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes., Zhang X, Lai M, Chang W, Yu I, Ding K, Mrazek J, Ng HL, Yang OO, Maslov DA, Zhou ZH, Nat Commun. 2016 Oct 18;7:13223. doi: 10.1038/ncomms13223. PMID:27752045

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (970 Kb) [Save to disk] CSU: Contacts of Structural Units for 5T2C Retrieve 5T2C in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5T2C from S2C, [Save to disk]

View 5T2C in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5T2C

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5t2c_AD] [5t2c_c] [5t2c_AE] [5t2c_AF] [5t2c_R] [5t2c_Ax] [5t2c_At] [5t2c_h] [5t2c_X] [5t2c_AT] [5t2c_Y] [5t2c_AQ] [5t2c_O] [5t2c_Ap] [5t2c_o] [5t2c_Av] [5t2c_i] [5t2c_G] [5t2c_An] [5t2c_AG] [5t2c_P] [5t2c_C] [5t2c_AH] [5t2c_Q] [5t2c_e] [5t2c_I] [5t2c_E] [5t2c_t] [5t2c_AJ] [5t2c_V] [5t2c_j] [5t2c_a] [5t2c_Au] [5t2c_q] [5t2c_s] [5t2c_g] [5t2c_Aw] [5t2c_F] [5t2c_AK] [5t2c_T] [5t2c_B] [5t2c_n] [5t2c_f] [5t2c_U] [5t2c_AC] [5t2c_AL] [5t2c_N] [5t2c_M] [5t2c_AV] [5t2c_AA] [5t2c_Ar] [5t2c_Ao] [5t2c_r] [5t2c_A0] [5t2c_b] [5t2c_Ay] [5t2c_L] [5t2c_W] [5t2c_AN] [5t2c_d] [5t2c_Az] [5t2c_Aq] [5t2c_AP] [5t2c_k] [5t2c_K] [5t2c_AB] [5t2c_AM] [5t2c_As] [5t2c_AR] [5t2c_AI] [5t2c_H] [5t2c_Z] [5t2c_p] [5t2c_m] [5t2c_AU] [5t2c_A] [5t2c_S] [5t2c_l] [5t2c_J] [5t2c_AO] [5t2c] [5t2c_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5T2C

Community annotation for 5T2C at PDBWiki (http://pdbwiki.org)

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