5V24	Transferase Transferase Inhibitor	date	Mar 02, 2017
title	Structure-Based Drug Design Of Novel Ask1 Inhibitors Using A Integrated Lead Optimization Strategy
authors	D.R.Dougan, J.D.Lawson
compound		source
Molecule: Mitogen-Activated Protein Kinase Kinase Kinase 5 Chain: A, B Fragment: Unp Residues 670-940 Synonym: Apoptosis Signal-Regulating Kinase 1,Ask-1,Mapker Kinase 5,Mekk 5; Ec: 2.7.11.25 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Map3k5, Ask1, Mapkkk5, Mekk5 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta 2(De3) Plyss Expression_system_vector_type: Plasmid Expression_system_plasmid: Peh8
symmetry	Space Group: P 65 2 2	R_factor 0.234 R_Free 0.266
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.610 78.610 429.785 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	8V7	enzyme	Transferase E.C.2.7.11.25 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure-based drug design of novel ASK1 inhibitors using an integrated lead optimization strategy., Gibson TS, Johnson B, Fanjul A, Halkowycz P, Dougan DR, Cole D, Swann S, Bioorg Med Chem Lett. 2017 Mar 2. pii: S0960-894X(17)30222-6. doi:, 10.1016/j.bmcl.2017.02.079. PMID:28291695

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk] Biological Unit Coordinates (5v24.pdb1.gz) 84 Kb Biological Unit Coordinates (5v24.pdb2.gz) 89 Kb LPC: Ligand-Protein Contacts for 5V24 CSU: Contacts of Structural Units for 5V24 Structure Factors (811 Kb) Retrieve 5V24 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5V24 from S2C, [Save to disk] Re-refined 5v24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5V24 in 3D

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Visual 3D analysis of 5V24

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5v24_B] [5v24_A] [5v24] SWISS-PROT database: Domain organization of by SWISSPFAM

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