6DHE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B, b


E, e


F, f


H, h


I, i


K, k


L, l


M, m


O, o
  • oxygen evolving activity


  • T, t


    Y, y


    Z, z


    a, A


    c, C


    d, D


    j, J


    r, R


    u, U


    v, V


    x, X


    Primary referenceStructures of the intermediates of Kok's photosynthetic water oxidation clock., Kern J, Chatterjee R, Young ID, Fuller FD, Lassalle L, Ibrahim M, Gul S, Fransson T, Brewster AS, Alonso-Mori R, Hussein R, Zhang M, Douthit L, de Lichtenberg C, Cheah MH, Shevela D, Wersig J, Seuffert I, Sokaras D, Pastor E, Weninger C, Kroll T, Sierra RG, Aller P, Butryn A, Orville AM, Liang M, Batyuk A, Koglin JE, Carbajo S, Boutet S, Moriarty NW, Holton JM, Dobbek H, Adams PD, Bergmann U, Sauter NK, Zouni A, Messinger J, Yano J, Yachandra VK, Nature. 2018 Nov;563(7731):421-425. doi: 10.1038/s41586-018-0681-2. Epub 2018 Nov, 7. PMID:30405241
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] () [Save to disk]
  • CSU: Contacts of Structural Units for 6DHE
  • Structure Factors (10737 Kb)
  • Retrieve 6DHE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DHE from S2C, [Save to disk]
  • View 6DHE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6DHE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dhe_A] [6dhe_r] [6dhe_M] [6dhe_F] [6dhe_e] [6dhe_j] [6dhe_Z] [6dhe_o] [6dhe_K] [6dhe_C] [6dhe_u] [6dhe_D] [6dhe_a] [6dhe_L] [6dhe_h] [6dhe_B] [6dhe_i] [6dhe_k] [6dhe_U] [6dhe_I] [6dhe_t] [6dhe_v] [6dhe_d] [6dhe_l] [6dhe_T] [6dhe_H] [6dhe_z] [6dhe_c] [6dhe_J] [6dhe_y] [6dhe_Y] [6dhe_f] [6dhe_E] [6dhe_b] [6dhe_X] [6dhe_O] [6dhe_x] [6dhe_R] [6dhe_V] [6dhe_m]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6DHE
  • Community annotation for 6DHE at PDBWiki (http://pdbwiki.org)

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