6OR3 Hydrolase date Apr 29, 2019
title Structure Of An Acyl Intermediate Of Thermomyces Lanuginosa With Palmitic Acid In An Orthorhombic Crystal
authors A.Mcpherson
compound source
Molecule: Lipase
Chain: A
Synonym: Triacylglycerol Lipase
Ec: 3.1.1.3
Organism_scientific: Thermomyces Lanuginosus
Organism_taxid: 5541
symmetry Space Group: I 2 2 2
R_factor 0.161 R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.865 85.268 86.741 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.45 Å
ligand CA, NAG, PLM enzyme Hydrolase E.C.3.1.1.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (6or3.pdb1.gz) 135 Kb
  • Biological Unit Coordinates (6or3.pdb2.gz) 535 Kb
  • LPC: Ligand-Protein Contacts for 6OR3
  • CSU: Contacts of Structural Units for 6OR3
  • Structure Factors (1955 Kb)
  • Retrieve 6OR3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6OR3 from S2C, [Save to disk]
  • View 6OR3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6OR3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6or3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6OR3
  • Community annotation for 6OR3 at PDBWiki (http://pdbwiki.org)

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