6RX8 Lyase date Jun 07, 2019
title Edds Lyase Variant D290my320m With Bound Fumarate
authors E.Grandi, G.J.Poelarends, A.M.W.H.Thunnissen
compound source
Molecule: Argininosuccinate Lyase
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Chelativorans Sp. (Strain Bnc1)
Organism_taxid: 266779
Strain: Bnc1
Gene: Meso_0564
Expression_system: Escherichia Coli K-12
Expression_system_taxid: 83333
symmetry Space Group: F 2 2 2
R_factor 0.188 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.160 144.230 144.451 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.92 Å
ligand FUM, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (240 Kb) [Save to disk]
  • Biological Unit Coordinates (6rx8.pdb1.gz) 933 Kb
  • LPC: Ligand-Protein Contacts for 6RX8
  • CSU: Contacts of Structural Units for 6RX8
  • Structure Factors (2770 Kb)
  • Retrieve 6RX8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6RX8 from S2C, [Save to disk]
  • View 6RX8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6RX8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6rx8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6RX8
  • Community annotation for 6RX8 at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science