1E5Z Electron Transport date Aug 04, 2000
title Azurin From Pseudomonas Aeruginosa, Reduced Form, Ph 9.0
authors H.Nar, A.Messerschmidt
compound source
Molecule: Azurin
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Expression_system: Escherichia Coli
Expression_system_taxid: 83333
Expression_system_strain: K-12
Expression_system_variant: Kmbl1164
symmetry Space Group: P 21 21 21
R_factor 0.190 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.800 81.020 109.990 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CU, NO3 enzyme
related structures by homologous chain: 1JVL, 1XB8
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • electron transfer activity


    • Primary referenceCrystal structure analysis of oxidized Pseudomonas aeruginosa azurin at pH 5.5 and pH 9.0. A pH-induced conformational transition involves a peptide bond flip., Nar H, Messerschmidt A, Huber R, van de Kamp M, Canters GW, J Mol Biol. 1991 Oct 5;221(3):765-72. PMID:1942029
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1e5z.pdb1.gz) 43 Kb
  • Biological Unit Coordinates (1e5z.pdb2.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1E5Z
  • CSU: Contacts of Structural Units for 1E5Z
  • Likely Quarternary Molecular Structure file(s) for 1E5Z
  • Retrieve 1E5Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E5Z from S2C, [Save to disk]
    • View 1E5Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1E5Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E5Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e5za_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1e5zb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1e5zc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1e5zd_, region D [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e5z_A] [1e5z_B] [1e5z_D] [1e5z_C] [1e5z]
  • SWISS-PROT database: [P00282]
  • Domain organization of [AZUR_PSEAE] by SWISSPFAM
    • Other resources with information on 1E5Z
  • Community annotation for 1E5Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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