1NEL Carbon-Oxygen Lyase date Aug 20, 1993
title Fluoride Inhibition Of Yeast Enolase: Crystal Structure Of T Enolase-Mg2+-F--Pi Complex At 2.6-Angstroms Resolution
authors L.Lebioda, E.Zhang, K.Lewinski, M.J.Brewer
compound source
Molecule: Enolase
Chain: A
Ec: 4.2.1.11
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
symmetry Space Group: P 42 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.500 122.500 67.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand F, MG, PO4 enzyme Lyase E.C.4.2.1.11 BRENDA
related structures by homologous chain: 1PDY
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFluoride inhibition of yeast enolase: crystal structure of the enolase-Mg(2+)-F(-)-Pi complex at 2.6 A resolution., Lebioda L, Zhang E, Lewinski K, Brewer JM, Proteins 1993 Jul;16(3):219-25. PMID:8346189
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (1nel.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 1NEL
  • CSU: Contacts of Structural Units for 1NEL
  • Likely Quarternary Molecular Structure file(s) for 1NEL
  • Retrieve 1NEL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1NEL from S2C, [Save to disk]
  • View 1NEL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1NEL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1NEL, from MSDmotif at EBI
  • Genome occurence of 1NEL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1nel_2, region 1-141 [Jmol] [rasmolscript] [script source]
        - Domain d1nel_1, region 142-436 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1nel_A] [1nel]
  • SWISS-PROT database: [P00924]
  • Domain organization of [ENO1_YEAST] by SWISSPFAM
  • Domains found in 1NEL: [Enolase_C] [Enolase_N ] by SMART
  • Other resources with information on 1NEL
  • Community annotation for 1NEL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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