1SNG Hydrolase Inhibitor date Mar 10, 2004
title Structure Of A Thermophilic Serpin In The Native State
authors K.F.Fulton, A.M.Buckle, L.D.Cabrita, J.A.Irving, R.E.Butcher, I.S S.Reeve, A.M.Lesk, S.P.Bottomley, J.Rossjohn, J.C.Whisstock
compound source
Molecule: Cog4826: Serine Protease Inhibitor
Chain: A
Engineered: Yes
Organism_scientific: Thermobifida Fusca
Organism_taxid: 2021
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Sg13009(Prep4)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe30
symmetry Space Group: P 21 21 21
R_factor 0.186 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.354 81.171 106.625 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand CAF, SO4 enzyme
related structures by homologous chain: 1MTP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe high resolution crystal structure of a native thermostable serpin reveals the complex mechanism underpinning the stressed to relaxed transition., Fulton KF, Buckle AM, Cabrita LD, Irving JA, Butcher RE, Smith I, Reeve S, Lesk AM, Bottomley SP, Rossjohn J, Whisstock JC, J Biol Chem 2005 Mar 4;280(9):8435-42. Epub 2004 Dec 7. PMID:15590653
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1sng.pdb1.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 1SNG
  • CSU: Contacts of Structural Units for 1SNG
  • Likely Quarternary Molecular Structure file(s) for 1SNG
  • Structure Factors (294 Kb)
  • Retrieve 1SNG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1SNG from S2C, [Save to disk]
  • Re-refined 1sng structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1SNG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1SNG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1SNG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1snga_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sng_A] [1sng]
  • SWISS-PROT database: [Q47NK3]
  • Domain organization of [Q47NK3_THEFY] by SWISSPFAM
  • Domain found in 1SNG: [SERPIN ] by SMART
  • Other resources with information on 1SNG
  • Community annotation for 1SNG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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