1T0V Ligand Binding Protein date Apr 13, 2004
title Nmr Solution Structure Of The Engineered Lipocalin Flua(R95k Northeast Structural Genomics Target Or17
authors J.L.Mills, G.Liu, A.Skerra, T.Szyperski, Northeast Structural Ge Consortium (Nesg)
compound source
Molecule: Bilin-Binding Protein
Chain: A
Synonym: Bbp; Anticalin Flua
Engineered: Yes
Mutation: Yes
Organism_scientific: Pieris Brassicae
Organism_common: Large Cabbage White
Organism_taxid: 7116
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm83
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pbbp21-Flua
methodSolution NMR
related structures by homologous chain: 1BBP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure and dynamics of the engineered fluorescein-binding lipocalin FluA reveal rigidification of beta-barrel and variable loops upon enthalpy-driven ligand binding., Mills JL, Liu G, Skerra A, Szyperski T, Biochemistry. 2009 Aug 11;48(31):7411-9. PMID:19603796
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (975 Kb) [Save to disk]
  • Biological Unit Coordinates (1t0v.pdb1.gz) 48 Kb
  • CSU: Contacts of Structural Units for 1T0V
  • Original NMR restraints for 1T0V from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1T0V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1T0V from S2C, [Save to disk]
  • View 1T0V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1T0V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1T0V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1t0v] [1t0v_A]
  • SWISS-PROT database: [P09464]
  • Domain organization of [BBP_PIEBR] by SWISSPFAM
  • Other resources with information on 1T0V
  • Community annotation for 1T0V at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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