1TKX CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW490745 date
authors Ren, J., Hopkins, A.L., Stuart, D.I., Stammers, D.K.
compound source
symmetry
R_factor
R_Free 0.287
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand CSD, GWB enzyme
related structures by homologous chain: 1LWE, 1QE1
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceDesign of non-nucleoside inhibitors of HIV-1 reverse transcriptase with improved drug resistance properties. 2., Freeman GA, Andrews Iii CW 3rd, Hopkins AL, Lowell GS, Schaller LT, Cowan JR, Gonzales SS, Koszalka GW, Hazen RJ, Boone LR, Ferris RG, Creech KL, Roberts GB, Short SA, Weaver K, Reynolds DJ, Milton J, Ren J, Stuart DI, Stammers DK, Chan JH, J Med Chem 2004 Nov 18;47(24):5923-36. PMID:15537347
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (162 Kb) [Save to disk]
  • Biological Unit Coordinates (1tkx.pdb1.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 1TKX
  • CSU: Contacts of Structural Units for 1TKX
  • Likely Quarternary Molecular Structure file(s) for 1TKX
  • Structure Factors (226 Kb)
  • Retrieve 1TKX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TKX from S2C, [Save to disk]
  • Re-refined 1tkx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1TKX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1TKX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TKX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tkxa1, region A:430-537 [Jmol] [rasmolscript] [script source]
        - Domain d1tkxa2, region A:7-427 [Jmol] [rasmolscript] [script source]
        - Domain d1tkxb1, region B:7-427 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tkx_A] [1tkx] [1tkx_B]
  • SWISS-PROT database: [P04585]
  • Domain organization of [POL_HV1H2] by SWISSPFAM
    • Other resources with information on 1TKX
  • Community annotation for 1TKX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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