1VA0	Transferase	date	Feb 05, 2004
title	Crystal Structure Of The Native Form Of Uroporphyrin III C-M Transferase From Thermus Thermophilus
authors	P.H.Rehse, T.Kitao, T.H.Tahirov, Riken Structural Genomicsprot Initiative (Rsgi)
compound		source
Molecule: Uroporphyrin-III C-Methyltransferase Chain: A, B Synonym: Hypothetical Protein Ttha0667 Ec: 2.1.1.107 Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 300852 Strain: Hb8 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11a
symmetry	Space Group: P 21 21 21	R_factor 0.199 R_Free 0.227
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.500 63.568 131.902 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.97 Å
ligand	CL, EDO	enzyme	Transferase E.C.2.1.1.107 BRENDA
related structures	by homologous chain: 1V9A
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structure of a closed-form uroporphyrinogen-III C-methyltransferase from Thermus thermophilus., Rehse PH, Kitao T, Tahirov TH, Acta Crystallogr D Biol Crystallogr. 2005 Jul;61(Pt 7):913-9. Epub 2005, Jun 24. PMID:15983414

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk] Biological Unit Coordinates (1va0.pdb1.gz) 75 Kb LPC: Ligand-Protein Contacts for 1VA0 CSU: Contacts of Structural Units for 1VA0 Likely Quarternary Molecular Structure file(s) for 1VA0 Structure Factors (550 Kb) Retrieve 1VA0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VA0 from S2C, [Save to disk] Re-refined 1va0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VA0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1VA0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1VA0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1va0_B] [1va0_A] [1va0] SWISS-PROT database: [Q5SKH6] Domain organization of [Q5SKH6_THET8] by SWISSPFAM

Other resources with information on 1VA0

Community annotation for 1VA0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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