1W2A Oxidoreductase date Jul 01, 2004
title Deacetoxycephalosporin C Synthase (With His-Tag) Complexed With Fe(II) And Ethylene Glycol
authors L.M.Oster, A.C.Terwisscha Van Scheltinga, K.Valegard, A.Mackenz A.Dubus, J.Hajdu, I.Andersson
compound source
Molecule: Deacetoxycephalosporin C Synthase
Chain: X
Synonym: Daocs, Expandase
Ec: 1.14.20.1
Engineered: Yes
Organism_scientific: Streptomyces Clavuligerus
Organism_taxid: 1901
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet-15b
symmetry Space Group: P 31 2 1
R_factor 0.228 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.800 137.800 48.600 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.51 Å
ligand EDO, FE enzyme Oxidoreductase E.C.1.14.20.1 BRENDA
related structures by homologous chain: 1W28, 1W2N
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceConformational flexibility of the C terminus with implications for substrate binding and catalysis revealed in a new crystal form of deacetoxycephalosporin C synthase., Oster LM, van Scheltinga AC, Valegard K, Hose AM, Dubus A, Hajdu J, Andersson I, J Mol Biol. 2004 Oct 8;343(1):157-71. PMID:15381427
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (1w2a.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1W2A
  • CSU: Contacts of Structural Units for 1W2A
  • Likely Quarternary Molecular Structure file(s) for 1W2A
  • Structure Factors (238 Kb)
  • Retrieve 1W2A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W2A from S2C, [Save to disk]
  • Re-refined 1w2a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W2A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W2A
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W2A, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1w2ax_, region X [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w2a] [1w2a_X]
  • SWISS-PROT database: [P18548]
  • Domain organization of [CEFE_STRCL] by SWISSPFAM
  • Other resources with information on 1W2A
  • Community annotation for 1W2A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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