2JQA Metal Binding Protein date May 30, 2007
title Solution Structure Of Apo-Dr1885 From Deinococcus Radioduran
authors L.Banci, I.Bertini, S.Ciofi Baffoni, E.Katsari, N.Katsaros, K.Kub
compound source
Molecule: Hypothetical Protein
Chain: A
Fragment: Sequence Database Residues 35-178
Engineered: Yes
Organism_scientific: Deinococcus Radiodurans
Organism_taxid: 243230
Strain: R1
Gene: Dr1885
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plyss
Expression_system_vector_type: Vector
Expression_system_vector: Pet21a(+)
methodSolution NMR
note 2JQA supersedes 1X7L
Primary referenceA copper(I) protein possibly involved in the assembly of CuA center of bacterial cytochrome c oxidase., Banci L, Bertini I, Ciofi-Baffoni S, Katsari E, Katsaros N, Kubicek K, Mangani S, Proc Natl Acad Sci U S A. 2005 Mar 15;102(11):3994-9. Epub 2005 Mar 7. PMID:15753304
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (855 Kb) [Save to disk]
  • Biological Unit Coordinates (2jqa.pdb1.gz) 44 Kb
  • CSU: Contacts of Structural Units for 2JQA
  • Original NMR restraints for 2JQA from PDB
  • Retrieve 2JQA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JQA from S2C, [Save to disk]
  • View 2JQA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JQA
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JQA, from MSDmotif at EBI
  • Fold representative 2jqa from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jqa] [2jqa_A]
  • SWISS-PROT database: [Q9RT80]
  • Domain organization of [Q9RT80_DEIRA] by SWISSPFAM
  • Other resources with information on 2JQA
  • Community annotation for 2JQA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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