2F91 Hydrolase Hydrolase Inhibitor date Dec 05, 2005
title 1.2a Resolution Structure Of A Crayfish Trypsin Complexed Wi Peptide Inhibitor, Sgti
authors K.Fodor, V.Harmat, C.Hetenyi, J.Kardos, J.Antal, A.Perczel, A.Patt G.Katona, L.Graf
compound source
Molecule: Hepatopancreas Trypsin
Chain: A
Ec: 3.4.21.4
Organism_scientific: Pontastacus Leptodactylus
Organism_common: Narrow-Clawed Crayfish
Organism_taxid: 6717
Tissue: Hepatopancreas

Molecule: Serine Protease Inhibitor III
Chain: B
Fragment: Protease Inhibitor Sgpi-1, Residues 20-54
Synonym: Schistocerca Gregaria Trypsin Inhibitor, Sgti
Engineered: Yes

Synthetic: Yes
Other_details: The Protein Was Chemically Synthesized, This Occurs Naturally In Schistocerca Gregaria (Desert Locust)
symmetry Space Group: P 21 21 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.283 59.673 97.302 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand CD, CL enzyme Hydrolase E.C.3.4.21.4 BRENDA
note 2F91 supersedes 1YR4
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceEnzyme:substrate hydrogen bond shortening during the acylation phase of serine protease catalysis., Fodor K, Harmat V, Neutze R, Szilagyi L, Graf L, Katona G, Biochemistry. 2006 Feb 21;45(7):2114-21. PMID:16475800
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (134 Kb) [Save to disk]
  • Biological Unit Coordinates (2f91.pdb1.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 2F91
  • CSU: Contacts of Structural Units for 2F91
  • Likely Quarternary Molecular Structure file(s) for 2F91
  • Structure Factors (497 Kb)
  • Retrieve 2F91 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F91 from S2C, [Save to disk]
  • Re-refined 2f91 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F91 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F91
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F91, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f91] [2f91_A] [2f91_B]
  • SWISS-PROT database: [Q52V24] [O46162]
  • Domain organization of [Q52V24_PONLE] [SGP1_SCHGR] by SWISSPFAM
  • Domain found in 2F91: [Tryp_SPc ] by SMART
  • Other resources with information on 2F91
  • Community annotation for 2F91 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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