1A41 TYPE 1-TOPOISOMERASE CATALYTIC FRAGMENT FROM VACCINIA VIRUS date
authors Cheng, C., Kussie, P., Pavletich, N., Shuman, S.
compound source
symmetry
R_factor
R_Free 0.3090000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases., Cheng C, Kussie P, Pavletich N, Shuman S, Cell 1998 Mar 20;92(6):841-50. PMID:9529259
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1a41.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1A41
  • CSU: Contacts of Structural Units for 1A41
  • Likely Quarternary Molecular Structure file(s) for 1A41
  • Retrieve 1A41 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1A41 from S2C, [Save to disk]
  • View 1A41 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1A41
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1A41, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1a41__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1a41 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1a41_A] [1a41]
  • SWISS-PROT database: [P68698]
  • Domain organization of [TOP1_VACCW] by SWISSPFAM
  • Other resources with information on 1A41
  • Community annotation for 1A41 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science