1B0F	Hydrolase	date	Nov 09, 1998
title	Crystal Structure Of Human Neutrophil Elastase With Mdl 101,
authors	H.A.Schreuder, W.A.Metz, N.P.Peet, J.T.Pelton, C.Tardif
compound		source
Molecule: Protein (Elastase) Chain: A Synonym: Hne Ec: 3.4.21.37		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Neutrophil
symmetry	Space Group: P 43 2 2	R_factor 0.160 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 75.800 75.800 108.500 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	FUC, NAG, SEI BindingDB	enzyme	Hydrolase E.C.3.4.21.37 BRENDA
related structures	by homologous chain: 1PPG
Gene Ontology	Chain Function Process Component A
Primary reference	Inhibition of human neutrophil elastase. 4. Design, synthesis, X-ray crystallographic analysis, and structure-activity relationships for a series of P2-modified, orally active peptidyl pentafluoroethyl ketones., Cregge RJ, Durham SL, Farr RA, Gallion SL, Hare CM, Hoffman RV, Janusz MJ, Kim HO, Koehl JR, Mehdi S, Metz WA, Peet NP, Pelton JT, Schreuder HA, Sunder S, Tardif C, J Med Chem 1998 Jul 2;41(14):2461-80. PMID:9651152

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk] Biological Unit Coordinates (1b0f.pdb1.gz) 36 Kb LPC: Ligand-Protein Contacts for 1B0F CSU: Contacts of Structural Units for 1B0F Likely Quarternary Molecular Structure file(s) for 1B0F Structure Factors (79 Kb) Retrieve 1B0F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1B0F from S2C, [Save to disk] Re-refined 1b0f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1B0F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1B0F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1B0F, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1b0fa_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1b0f] [1b0f_A] SWISS-PROT database: [P08246] Domain organization of [ELNE_HUMAN] by SWISSPFAM Domain found in 1B0F: [Tryp_SPc ] by SMART

Other resources with information on 1B0F

Community annotation for 1B0F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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