4V2F Tetracycline repressor TetR(D), unliganded date
authors Werten, S., Orth, P., Saenger, W., Hinrichs, W.
compound source
symmetry
R_factor
R_Free 0.27811
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
note 4V2F supersedes 1BJ0
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTetracycline Repressor Allostery Does Not Depend on Divalent Metal Recognition., Werten S, Dalm D, Palm GJ, Grimm CC, Hinrichs W, Biochemistry. 2014 Dec 9. PMID:25432019
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (4v2f.pdb1.gz) 61 Kb
  • CSU: Contacts of Structural Units for 4V2F
  • Structure Factors (62 Kb)
  • Retrieve 4V2F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4V2F from S2C, [Save to disk]
  • Re-refined 4v2f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4V2F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4V2F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4V2F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v2f_A] [4v2f]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4V2F
  • Community annotation for 4V2F at PDBWiki (http://pdbwiki.org)

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