1DXM	Oxidoreductases(Acting On Ch-Nh2 Donor)	date	Jan 10, 2000
title	Reduced Form Of The H Protein From Glycine Decarboxylase Com
authors	M.Faure, C.Cohen-Addad, M.Neuburger, R.Douce
compound		source
Molecule: H Protein Chain: A, B Synonym: Glycine Cleavage System H Protein Engineered: Yes		Organism_scientific: Pisum Sativum Organism_common: Garden Pea Organism_taxid: 3888 Organ: Leaf Organelle: Mitochondria Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_cellular_location: Cytoplasm Expression_system_plasmid: Pet-Hm
symmetry	Space Group: P 31 2 1	R_factor 0.204 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 56.410 56.410 135.170 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	RED	enzyme
related structures	by homologous chain: 1HPC
Gene Ontology	Chain Function Process Component A, B
Primary reference	Interaction between the lipoamide-containing H-protein and the lipoamide dehydrogenase (L-protein) of the glycine decarboxylase multienzyme system 2. Crystal structures of H- and L-proteins., Faure M, Bourguignon J, Neuburger M, MacHerel D, Sieker L, Ober R, Kahn R, Cohen-Addad C, Douce R, Eur J Biochem 2000 May;267(10):2890-8. PMID:10806386

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk] Biological Unit Coordinates (1dxm.pdb1.gz) 22 Kb Biological Unit Coordinates (1dxm.pdb2.gz) 23 Kb LPC: Ligand-Protein Contacts for 1DXM CSU: Contacts of Structural Units for 1DXM Likely Quarternary Molecular Structure file(s) for 1DXM Retrieve 1DXM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DXM from S2C, [Save to disk]

View 1DXM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DXM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DXM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1dxma_, region A [Jmol] [rasmolscript] [script source]     - Domain d1dxmb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dxm_B] [1dxm_A] [1dxm] SWISS-PROT database: [P16048] Domain organization of [GCSH_PEA] by SWISSPFAM

Other resources with information on 1DXM

Community annotation for 1DXM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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