1F8Q CRYSTAL STRUCTURE OF ALPHA-MOMORCHARIN IN ACETONITRILE-WATER MIXTURE date
authors Zhu, G., Huang, Q., Qian, M., Tang, Y.
compound source
symmetry
R_factor
R_Free 0.2720000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand CCN, MAN, NAG, PTD, XYS enzyme
related structures by homologous chain: 1MRI
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceCrystal structure of alpha-momorcharin in 80% acetonitrile--water mixture., Zhu G, Huang Q, Qian M, Tang Y, Biochim Biophys Acta 2001 Jul 9;1548(1):152-8. PMID:11451448
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (1f8q.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 1F8Q
  • CSU: Contacts of Structural Units for 1F8Q
  • Likely Quarternary Molecular Structure file(s) for 1F8Q
  • Structure Factors (82 Kb)
  • Retrieve 1F8Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F8Q from S2C, [Save to disk]
  • Re-refined 1f8q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1F8Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F8Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1F8Q, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f8qa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1f8q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f8q] [1f8q_A]
  • SWISS-PROT database: [P16094]
  • Domain organization of [RIP1_MOMCH] by SWISSPFAM
  • Other resources with information on 1F8Q
  • Community annotation for 1F8Q at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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