1MR8 MIGRATION INHIBITORY FACTOR-RELATED PROTEIN 8 FROM HUMAN date
authors Ishikawa, K., Nakagawa, A., Tanaka, I., Nishihira, J.
compound source
symmetry
R_factor
R_Free 0.2340000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe structure of human MRP8, a member of the S100 calcium-binding protein family, by MAD phasing at 1.9 A resolution., Ishikawa K, Nakagawa A, Tanaka I, Suzuki M, Nishihira J, Acta Crystallogr D Biol Crystallogr 2000 May;56 ( Pt 5):559-66. PMID:10771424
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1mr8.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (1mr8.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 1MR8
  • CSU: Contacts of Structural Units for 1MR8
  • Likely Quarternary Molecular Structure file(s) for 1MR8
  • Structure Factors (44 Kb)
  • Retrieve 1MR8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1MR8 from S2C, [Save to disk]
  • View 1MR8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1MR8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1MR8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1mr8a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1mr8b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1mr8_B] [1mr8] [1mr8_A]
  • SWISS-PROT database: [P05109]
  • Domain organization of [S10A8_HUMAN] by SWISSPFAM
  • Domain found in 1MR8: [S_100 ] by SMART
  • Other resources with information on 1MR8
  • Community annotation for 1MR8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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