1O0W Crystal structure of Ribonuclease III (TM1102) from Thermotoga maritima at 2.0 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.23
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • nuclease activity
  • endonuclease activity
  • ribonuclease III activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1o0w.pdb1.gz) 85 Kb
  • CSU: Contacts of Structural Units for 1O0W
  • Likely Quarternary Molecular Structure file(s) for 1O0W
  • Structure Factors (264 Kb)
  • Retrieve 1O0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1O0W from S2C, [Save to disk]
  • Re-refined 1o0w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1O0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1O0W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1O0W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1o0wa1, region A:-1-167 [Jmol] [rasmolscript] [script source]
        - Domain d1o0wa2, region A:168-236 [Jmol] [rasmolscript] [script source]
        - Domain d1o0wb1, region B:-1-167 [Jmol] [rasmolscript] [script source]
        - Domain d1o0wb2, region B:168-237 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1o0w] [1o0w_B] [1o0w_A]
  • SWISS-PROT database: [Q9X0I6]
  • Domain organization of [RNC_THEMA] by SWISSPFAM
  • Domains found in 1O0W: [DSRM] [RIBOc ] by SMART
  • Other resources with information on 1O0W
  • Community annotation for 1O0W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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