1XUO X-ray structure of LFA-1 I-domain bound to a 1,4-diazepane-2,5-dione inhibitor at 1.8A resolution date
authors Wattanasin, S., Kallen, J., Myers, S., Guo, Q., Sabio, M., Ehrhardt, C., Albert, R., Hommel, U., Weckbecker, G., Welzenbach, K.
compound source
symmetry
R_factor
R_Free 0.21409
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand LA1, MG enzyme
Primary reference1,4-Diazepane-2,5-diones as novel inhibitors of LFA-1., Wattanasin S, Kallen J, Myers S, Guo Q, Sabio M, Ehrhardt C, Albert R, Hommel U, Weckbecker G, Welzenbach K, Weitz-Schmidt G, Bioorg Med Chem Lett 2005 Feb 15;15(4):1217-20. PMID:15686945
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1xuo.pdb1.gz) 34 Kb
  • Biological Unit Coordinates (1xuo.pdb2.gz) 32 Kb
  • LPC: Ligand-Protein Contacts for 1XUO
  • CSU: Contacts of Structural Units for 1XUO
  • Likely Quarternary Molecular Structure file(s) for 1XUO
  • Structure Factors (267 Kb)
  • Retrieve 1XUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XUO from S2C, [Save to disk]
  • Re-refined 1xuo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XUO
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1XUO, from MSDmotif at EBI
  • Fold representative 1xuo from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xuo_A] [1xuo] [1xuo_B]
  • SWISS-PROT database: [P20701]
  • Domain organization of [ITAL_HUMAN] by SWISSPFAM
  • Domain found in 1XUO: [VWA ] by SMART
  • Other resources with information on 1XUO
  • Community annotation for 1XUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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