2J5D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 16 Modelsresolution
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceUnique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger., Bocharov EV, Pustovalova YE, Pavlov KV, Volynsky PE, Goncharuk MV, Ermolyuk YS, Karpunin DV, Schulga AA, Kirpichnikov MP, Efremov RG, Maslennikov IV, Arseniev AS, J Biol Chem. 2007 Jun 1;282(22):16256-66. Epub 2007 Apr 4. PMID:17412696
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (294 Kb) [Save to disk]
  • Biological Unit Coordinates (2j5d.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 2J5D
  • Original NMR restraints for 2J5D from PDB
  • Retrieve 2J5D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J5D from S2C, [Save to disk]
  • View 2J5D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j5d] [2j5d_A] [2j5d_B]
  • SWISS-PROT database: [Q12983]
  • Belongs to the bcl2/adenovirus e1b-interacting protein 3 (bnip3) family according to TCDB.

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