2LKX NMR structure of the homeodomain of Pitx2 in complex with a TAATCC DNA binding site date
authors Baird-Titus, J.M., Doerdelmann, T., Chaney, B.A., Clark-Baldwin, K., Dave, V., Ma, J.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
note 2LKX supersedes 1YZ8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the K50 class homeodomain PITX2 bound to DNA and implications for mutations that cause Rieger syndrome., Chaney BA, Clark-Baldwin K, Dave V, Ma J, Rance M, Biochemistry. 2005 May 24;44(20):7497-511. PMID:15895993
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (574 Kb) [Save to disk]
  • Biological Unit Coordinates (2lkx.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 2LKX
  • Original NMR restraints for 2LKX from PDB
  • Retrieve 2LKX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2LKX from S2C, [Save to disk]
  • View 2LKX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2LKX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2LKX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2lkx] [2lkx_C] [2lkx_A] [2lkx_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2LKX: [HOX ] by SMART
  • Other resources with information on 2LKX
  • Community annotation for 2LKX at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science