2EJ3 Transferase date Mar 14, 2007
title Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Complexed With Gabapentin
authors M.Goto
compound source
Molecule: Branched-Chain Amino Acid Aminotransferase
Chain: A, B, C
Synonym: Ilve
Ec: 2.6.1.42
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 300852
Strain: Hb8
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 41 21 2
R_factor 0.188 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.714 143.714 115.717 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand GBN, MPD, PLP enzyme Transferase E.C.2.6.1.42 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (2ej3.pdb1.gz) 295 Kb
  • LPC: Ligand-Protein Contacts for 2EJ3
  • CSU: Contacts of Structural Units for 2EJ3
  • Likely Quarternary Molecular Structure file(s) for 2EJ3
  • Structure Factors (539 Kb)
  • Retrieve 2EJ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EJ3 from S2C, [Save to disk]
  • Re-refined 2ej3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EJ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EJ3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EJ3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ej3] [2ej3_A] [2ej3_C] [2ej3_B]
  • SWISS-PROT database: [Q5SM19]
  • Domain organization of [Q5SM19_THET8] by SWISSPFAM
  • Other resources with information on 2EJ3
  • Community annotation for 2EJ3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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