2J9R	Thymidine kinase from B. anthracis in complex with dT.	date
authors	Kosinska, U., Carnrot, C., Sandrini, M.P.B., Clausen, A.R., Wang, L., Piskur, J., Eriksson, S., Eklund, H.
compound		source
symmetry		R_factor R_Free 0.244
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.70
ligand	PO4, THM, ZN	enzyme
Gene Ontology	Chain Function Process Component A thymidine kinase activity
Primary reference	Structural studies of thymidine kinases from Bacillus anthracis and Bacillus cereus provide insights into quaternary structure and conformational changes upon substrate binding., Kosinska U, Carnrot C, Sandrini MP, Clausen AR, Wang L, Piskur J, Eriksson S, Eklund H, FEBS J. 2007 Feb;274(3):727-37. PMID:17288553

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk] Biological Unit Coordinates (2j9r.pdb1.gz) 114 Kb LPC: Ligand-Protein Contacts for 2J9R CSU: Contacts of Structural Units for 2J9R Likely Quarternary Molecular Structure file(s) for 2J9R Structure Factors (125 Kb) Retrieve 2J9R in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J9R from S2C, [Save to disk] Re-refined 2j9r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2J9R in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2J9R

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2J9R, from MSDmotif at EBI Fold representative 2j9r from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j9r_A] [2j9r] SWISS-PROT database: [Q81JX0] Domain organization of [KITH_BACAN] by SWISSPFAM

Other resources with information on 2J9R

Community annotation for 2J9R at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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