2J9R Thymidine kinase from B. anthracis in complex with dT. date
authors Kosinska, U., Carnrot, C., Sandrini, M.P.B., Clausen, A.R., Wang, L., Piskur, J., Eriksson, S., Eklund, H.
compound source
symmetry
R_factor
R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand PO4, THM, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • thymidine kinase activity


  • Primary referenceStructural studies of thymidine kinases from Bacillus anthracis and Bacillus cereus provide insights into quaternary structure and conformational changes upon substrate binding., Kosinska U, Carnrot C, Sandrini MP, Clausen AR, Wang L, Piskur J, Eriksson S, Eklund H, FEBS J. 2007 Feb;274(3):727-37. PMID:17288553
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (2j9r.pdb1.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 2J9R
  • CSU: Contacts of Structural Units for 2J9R
  • Likely Quarternary Molecular Structure file(s) for 2J9R
  • Structure Factors (125 Kb)
  • Retrieve 2J9R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J9R from S2C, [Save to disk]
  • Re-refined 2j9r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
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  • Visual 3D analysis of 2J9R
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2J9R, from MSDmotif at EBI
  • Fold representative 2j9r from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j9r_A] [2j9r]
  • SWISS-PROT database: [Q81JX0]
  • Domain organization of [KITH_BACAN] by SWISSPFAM
  • Other resources with information on 2J9R
  • Community annotation for 2J9R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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