2JIL Crystal structure of 2nd PDZ domain of glutamate receptor interacting protein-1 (GRIP1) date
authors Tickle, J., Elkins, J., Pike, A.C.W., Cooper, C., Salah, E., Papagrigoriou, E., Delft, F.von., Edwards, A., Arrowsmith, C.H., Weigelt, J., Sundstrom, M., Doyle, D.
compound source
symmetry
R_factor
R_Free 0.228
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand EDO, SCN enzyme
note 2JIL is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (2jil.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (2jil.pdb2.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 2JIL
  • CSU: Contacts of Structural Units for 2JIL
  • Likely Quarternary Molecular Structure file(s) for 2JIL
  • Structure Factors (352 Kb)
  • Retrieve 2JIL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JIL from S2C, [Save to disk]
  • Re-refined 2jil structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JIL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JIL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JIL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jil] [2jil_B] [2jil_A]
  • SWISS-PROT database: [Q9Y3R0]
  • Domain organization of [GRIP1_HUMAN] by SWISSPFAM
  • Domain found in 2JIL: [PDZ ] by SMART
  • Other resources with information on 2JIL
  • Community annotation for 2JIL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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