2V90 Crystal structure of the 3rd PDZ domain of intestine- and kidney- enriched PDZ domain IKEPP (PDZD3) date
authors Uppenberg, J., Gileadi, C., Phillips, C., Elkins, J., Bunkoczi, G., Cooper, C., Pike, A.C.W., Salah, E., Ugochukwu, E., Arrowsmith, C.H., Edwards, A., Sundstrom, M., Weigelt, J., Doyle, D.A.
compound source
R_Free 0.256
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand SO4 enzyme
F, A, D, C, E, B

Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2v90.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (2v90.pdb2.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2V90
  • CSU: Contacts of Structural Units for 2V90
  • Likely Quarternary Molecular Structure file(s) for 2V90
  • Structure Factors (483 Kb)
  • Retrieve 2V90 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2V90 from S2C, [Save to disk]
  • Re-refined 2v90 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2V90 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2V90
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2V90, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2v90_F] [2v90_C] [2v90_A] [2v90_B] [2v90] [2v90_E] [2v90_D]
  • SWISS-PROT database: [Q86UT5]
  • Domain organization of [NHRF4_HUMAN] by SWISSPFAM
  • Domain found in 2V90: [PDZ ] by SMART
  • Other resources with information on 2V90
  • Community annotation for 2V90 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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