2VQ6 Hydrolase date Mar 11, 2008
title Torpedo Californica Acetylcholinesterase Complexed With 2-Pa
authors M.Harel, I.Silman, J.L.Sussman
compound source
Molecule: Acetylcholinesterase
Chain: A
Fragment: Residues 22-464
Synonym: Ache
Ec: 3.1.1.7
Other_details: 2-Formyl-1-Methyl-Pyridinium Chloride (Praly Pam) In Active Site Gorge
Organism_scientific: Torpedo Californica
Organism_common: Pacific Electric Ray
Organism_taxid: 7787
symmetry Space Group: P 31 2 1
R_factor 0.171 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.950 113.950 138.050 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.71 Å
ligand FP1, NAG, SO4 enzyme Hydrolase E.C.3.1.1.7 BRENDA
note 2VQ6 supersedes 2VB4
Gene
Ontology
ChainFunctionProcessComponent
A
  • acetylcholine catabolic proc...

  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (2vq6.pdb1.gz) 87 Kb
  • LPC: Ligand-Protein Contacts for 2VQ6
  • CSU: Contacts of Structural Units for 2VQ6
  • Likely Quarternary Molecular Structure file(s) for 2VQ6
  • Structure Factors (198 Kb)
  • Retrieve 2VQ6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VQ6 from S2C, [Save to disk]
  • Re-refined 2vq6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VQ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2VQ6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VQ6, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vq6_A] [2vq6]
  • SWISS-PROT database: [P04058]
  • Domain organization of [ACES_TORCA] by SWISSPFAM
  • Other resources with information on 2VQ6
  • Community annotation for 2VQ6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science