3D4V		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FMG	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Synthesis and structure of duplex DNA containing the genotoxic nucleobase lesion N7-methylguanine., Lee S, Bowman BR, Ueno Y, Wang S, Verdine GL, J Am Chem Soc. 2008 Sep 3;130(35):11570-1. Epub 2008 Aug 8. PMID:18686953

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (202 Kb) [Save to disk] Biological Unit Coordinates (3d4v.pdb1.gz) 196 Kb LPC: Ligand-Protein Contacts for 3D4V CSU: Contacts of Structural Units for 3D4V Likely Quarternary Molecular Structure file(s) for 3D4V Structure Factors (218 Kb) Retrieve 3D4V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D4V from S2C, [Save to disk] Re-refined 3d4v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D4V in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d4v] [3d4v_A] [3d4v_B] [3d4v_C] [3d4v_D] [3d4v_E] [3d4v_F] [3d4v_G] [3d4v_H] SWISS-PROT database: [P04395] Domains found in 3D4V: [AlkA_N] [ENDO3c ] by SMART

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