3HNO Transferase date May 31, 2009
title Crystal Structure Of Pyrophosphate-Dependent Phosphofructoki Nitrosospira Multiformis. Northeast Structural Genomics Con Target Id Nmr42
authors J.Seetharaman, M.Abashidze, S.Sahdev, H.Janjua, R.Xiao, C.Ciccosa E.L.Foote, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong, N Structural Genomics Consortium (Nesg)
compound source
Molecule: Pyrophosphate-Dependent Phosphofructokinase
Chain: A, B, C, D
Ec: 2.7.1.90
Engineered: Yes
Organism_scientific: Nitrosospira Multiformis Atcc 25196
Organism_taxid: 323848
Atcc: 25196
Gene: Nmul_a0740
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Pet21
symmetry Space Group: C 1 2 1
R_factor 0.216 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
211.895 89.322 115.462 90.00 119.12 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand BR enzyme Transferase E.C.2.7.1.90 BRENDA
Gene NMUL
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • 6-phosphofructokinase activi...
  • diphosphate-fructose-6-phosp...


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (247 Kb) [Save to disk]
  • Biological Unit Coordinates (3hno.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (3hno.pdb2.gz) 124 Kb
  • Biological Unit Coordinates (3hno.pdb3.gz) 122 Kb
  • Biological Unit Coordinates (3hno.pdb4.gz) 124 Kb
  • LPC: Ligand-Protein Contacts for 3HNO
  • CSU: Contacts of Structural Units for 3HNO
  • Likely Quarternary Molecular Structure file(s) for 3HNO
  • Structure Factors (1843 Kb)
  • Retrieve 3HNO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HNO from S2C, [Save to disk]
  • Re-refined 3hno structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HNO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HNO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HNO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hno_A] [3hno_B] [3hno_C] [3hno_D] [3hno]
  • SWISS-PROT database: [Q2YB24]
  • Domain organization of [Q2YB24_NITMU] by SWISSPFAM
  • Other resources with information on 3HNO
  • Community annotation for 3HNO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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