3L9S Oxidoreductase date Jan 05, 2010
title Crystal Structure Of Salmonella Enterica Serovar Typhimurium
authors B.Heras, R.Jarrott, S.R.Shouldice, G.Guncar
compound source
Molecule: Thiol:Disulfide Interchange Protein
Chain: A
Fragment: Unp Residues 19-207
Ec: 5.3.4.1
Engineered: Yes
Organism_scientific: Salmonella Enterica Subsp. Enterica Se Typhimurium;
Organism_taxid: 216597
Strain: Sl1344
Gene: Dsba, Stm3997
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petlic
symmetry Space Group: P 1 21 1
R_factor 0.145 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
37.377 61.837 42.951 90.00 101.32 90.00
method X-Ray Diffractionresolution 1.58 Å
ligand
enzyme Isomerase E.C.5.3.4.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional characterization of three DsbA paralogues from Salmonella enterica serovar typhimurium., Heras B, Totsika M, Jarrott R, Shouldice SR, Guncar G, Achard ME, Wells TJ, Argente MP, McEwan AG, Schembri MA, J Biol Chem. 2010 Jun 11;285(24):18423-32. Epub 2010 Mar 16. PMID:20233716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3l9s.pdb1.gz) 67 Kb
  • CSU: Contacts of Structural Units for 3L9S
  • Structure Factors (292 Kb)
  • Retrieve 3L9S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3L9S from S2C, [Save to disk]
  • Re-refined 3l9s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3L9S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3L9S
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3L9S, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3l9s_A] [3l9s]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3L9S
  • Community annotation for 3L9S at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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