3T4E Oxidoreductase date Jul 25, 2011
title 1.95 Angstrom Crystal Structure Of Shikimate 5-Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhimuriu Complex With Nad
authors G.Minasov, S.H.Light, A.Halavaty, L.Shuvalova, I.Dubrovska, J.Win L.Papazisi, W.F.Anderson, Center For Structural Genomics Of I Diseases (Csgid)
compound source
Molecule: Quinateshikimate Dehydrogenase
Chain: A, B
Synonym: Nad-Dependent Shikimate 5-Dehydrogenase 2
Ec: 1.1.1.282
Engineered: Yes
Organism_scientific: Salmonella Enterica Subsp. Enterica Se Typhimurium;
Organism_taxid: 90371
Strain: Lt2
Gene: Aroe, Stm1359, Ydib
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21 Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 1 21 1
R_factor 0.166 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.049 111.392 66.380 90.00 96.20 90.00
method X-Ray Diffractionresolution 1.95 Å
ligand NAD, PO4 enzyme Oxidoreductase E.C.1.1.1.282 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]
  • Biological Unit Coordinates (3t4e.pdb1.gz) 206 Kb
  • LPC: Ligand-Protein Contacts for 3T4E
  • CSU: Contacts of Structural Units for 3T4E
  • Structure Factors (686 Kb)
  • Retrieve 3T4E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3T4E from S2C, [Save to disk]
  • Re-refined 3t4e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3T4E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3T4E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3T4E, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3t4e_A] [3t4e_B] [3t4e]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3T4E
  • Community annotation for 3T4E at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
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