3UTO Transferase date Nov 26, 2011
title Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26)
authors E.Castelmur, S.Barbieri, O.Mayans
compound source
Molecule: Twitchin
Chain: A, B
Fragment: Twitchin Kinase Region (Fn3-Nl-Kin-Crd-Ig), Unp R 6108-6675;
Synonym: Uncoordinated Protein 22
Ec: 2.7.11.1
Engineered: Yes
 Organism_scientific: Caenorhabditis Elegans
Organism_common: Nematode
Organism_taxid: 6239
Gene: Unc-22, Zk617.1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Petm-11
symmetry Space Group: P 21 21 2
R_factor 0.175 R_Free 0.213
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.700 158.210 60.460 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand FLC, GOL, P33, PEG enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceIdentification of an N-terminal inhibitory extension as the primary mechanosensory regulator of twitchin kinase., von Castelmur E, Strumpfer J, Franke B, Bogomolovas J, Barbieri S, Qadota H, Konarev PV, Svergun DI, Labeit S, Benian GM, Schulten K, Mayans O, Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13608-13. Epub 2012 Aug 6. PMID:22869697
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (382 Kb) [Save to disk]
  • Biological Unit Coordinates (3uto.pdb1.gz) 189 Kb
  • Biological Unit Coordinates (3uto.pdb2.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 3UTO
  • CSU: Contacts of Structural Units for 3UTO
  • Structure Factors (683 Kb)
  • Retrieve 3UTO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UTO from S2C, [Save to disk]
  • Re-refined 3uto structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3UTO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3UTO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UTO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uto] [3uto_B] [3uto_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 3UTO: [FN3] [IGc2] [S_TKc ] by SMART
    • Other resources with information on 3UTO
  • Community annotation for 3UTO at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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