3V8T	Transferase Transferase Inhibitor	date	Dec 23, 2011
title	Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase I Catalytic Domain With Thienopyrazolylindole Inhibitor 477
authors	L.R.Mclean, Y.Zhang
compound		source
Molecule: Tyrosine-Protein Kinase Itktsk Chain: A, B Fragment: Unp Residues 357-620 Synonym: Interleukin-2-Inducible T Cell Kinase, Il-2-Induci Kinase, Kinase Emt, T-Cell-Specific Kinase, Tyrosine-Protei Lyk; Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Itk, Emt, Lyk Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pfastbac1
symmetry	Space Group: C 1 2 1	R_factor 0.220 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 145.702 69.684 68.224 90.00 107.78 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	477, SO4	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	X-ray crystallographic structure-based design of selective thienopyrazole inhibitors for interleukin-2-inducible tyrosine kinase., McLean LR, Zhang Y, Zaidi N, Bi X, Wang R, Dharanipragada R, Jurcak JG, Gillespy TA, Zhao Z, Musick KY, Choi YM, Barrague M, Peppard J, Smicker M, Duguid M, Parkar A, Fordham J, Kominos D, Bioorg Med Chem Lett. 2012 May 1;22(9):3296-300. Epub 2012 Mar 11. PMID:22464456

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (3v8t.pdb1.gz) 41 Kb Biological Unit Coordinates (3v8t.pdb2.gz) 42 Kb Biological Unit Coordinates (3v8t.pdb3.gz) 81 Kb LPC: Ligand-Protein Contacts for 3V8T CSU: Contacts of Structural Units for 3V8T Structure Factors (935 Kb) Retrieve 3V8T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3V8T from S2C, [Save to disk] Re-refined 3v8t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V8T in 3D

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Visual 3D analysis of 3V8T

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3V8T, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v8t_A] [3v8t] [3v8t_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3V8T: [TyrKc ] by SMART

Other resources with information on 3V8T

Community annotation for 3V8T at PDBWiki (http://pdbwiki.org)

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