3BHM Oxidoreductase date Nov 28, 2007
title Crystal Structure Of Human Carbonyl Reductase 1 In Complex W Hydroxymethylglutathione
authors R.L.Bateman, D.Rauh, K.M.Shokat
compound source
Molecule: Carbonyl Reductase [Nadph] 1
Chain: A
Synonym: Nadph-Dependent Carbonyl Reductase 1
Ec: 1.1.1.184
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cbr1, Cbr, Crn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11b
symmetry Space Group: P 21 21 21
R_factor 0.171 R_Free 0.206
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.158 55.943 95.274 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand AB3, AHE, NAP, SO4 enzyme Oxidoreductase E.C.1.1.1.184 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHuman carbonyl reductase 1 is an S-nitrosoglutathione reductase., Bateman RL, Rauh D, Tavshanjian B, Shokat KM, J Biol Chem. 2008 Sep 29. PMID:18826943
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3bhm.pdb1.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3BHM
  • CSU: Contacts of Structural Units for 3BHM
  • Likely Quarternary Molecular Structure file(s) for 3BHM
  • Structure Factors (198 Kb)
  • Retrieve 3BHM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BHM from S2C, [Save to disk]
  • Re-refined 3bhm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BHM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BHM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BHM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bhm_A] [3bhm]
  • SWISS-PROT database: [P16152]
  • Domain organization of [CBR1_HUMAN] by SWISSPFAM
  • Other resources with information on 3BHM
  • Community annotation for 3BHM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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