3CV7 Oxidoreductase date Apr 18, 2008
title Crystal Structure Of Porcine Aldehyde Reductase Ternary Comp
authors V.Carbone, O.El-Kabbani
compound source
Molecule: Alcohol Dehydrogenase
Chain: A
Synonym: Aldehyde Reductase, Aldo-Keto Reductase Family 1 M
Ec: 1.1.1.2
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Tissue: Kidney
symmetry Space Group: P 65 2 2
R_factor 0.191 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.385 67.385 246.106 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.41 Å
ligand C2U, NAP, SO4 BindingDB enzyme Oxidoreductase E.C.1.1.1.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of aldehyde reductase in ternary complex with coenzyme and the potent 20alpha-hydroxysteroid dehydrogenase inhibitor 3,5-dichlorosalicylic acid: implications for inhibitor binding and selectivity., Carbone V, Chung R, Endo S, Hara A, El-Kabbani O, Arch Biochem Biophys. 2008 Nov 1;479(1):82-7. Epub 2008 Aug 28. PMID:18782556
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (3cv7.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 3CV7
  • CSU: Contacts of Structural Units for 3CV7
  • Likely Quarternary Molecular Structure file(s) for 3CV7
  • Structure Factors (102 Kb)
  • Retrieve 3CV7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CV7 from S2C, [Save to disk]
  • Re-refined 3cv7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CV7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CV7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CV7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cv7] [3cv7_A]
  • SWISS-PROT database: [P50578]
  • Domain organization of [AK1A1_PIG] by SWISSPFAM
  • Other resources with information on 3CV7
  • Community annotation for 3CV7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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